TransBio

Translational Bioinformatics

Tonsil

List of recording from the Tonsil-HCA meetings:

Please check the videos here https://www.bioinfomeetsml4lifesciences.org/tonsil

30 April 2021

Link: https://vimeo.com/544477197

Selected notes from the conversation:

    00:53:57 Marco Bühler: This are the groups you defined in the plan:

  • Myeloid: Marco & Juan
  • Epithelial: Marco + ?
  • Plasmocytoid: Marco + ?
  • FDCs: Marco + ?
  • CD4 T Cells: Juan, Ramon
  • NK-ILC-CD8: Ramon/Iva (KI, Sweden)
  • Naïve/memory B cells: Marta, Sara
  • Plasma cells: Iñaki/Xabi, Sara
  • Germinal center: Marta/Marco

 

    01:15:22 Marco Bühler: Elías says:

Lou staudt has a paper with a loss-of-function RNA interference screen of myltiple mieloma. I wonder if could be some useful information. Cancer Cell 2013 Apr 15;23(4):435-49.

 

16 April 2021

Link: https://vimeo.com/539334407

09 April 2021

Link: https://vimeo.com/535455453

26 March 2021

Link: https://vimeo.com/530238667

Selected notes/refs from the conversation:

  • 00:14:16 Elias Campo: https://pubmed.ncbi.nlm.nih.gov/33526861/
  • 00:14:16 Elias Campo: https://pubmed.ncbi.nlm.nih.gov/33526861/
  • 00:18:44 Elias Campo: Leukemia. 2020 Aug;34(8):2012-2024. doi: 10.1038/s41375-020-0873-2.
  • 00:20:48 Elias Campo: Leukemia. 2019 Mar;33(3):625-637. doi: 10.1038/s41375-018-0250-6.
  • 00:25:34 Juan C. Nieto S.: https://www.nature.com/articles/s41375-020-01063-7
  • 00:27:18 Juan C. Nieto S.: https://cancerimmunolres.aacrjournals.org/content/canimm/7/5/784.full.pdf
  • 00:27:58 Juan C. Nieto S.: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6110381/
  • 00:32:08 Juan C. Nieto S.: https://www.nature.com/articles/s41586-019-1325-x

 

19 March 2021

Link: https://vimeo.com/530237430

  • 00:11:57 Ramon Massoni Badosa: https://www.biorxiv.org/content/10.1101/2021.03.16.435578v1.full.pdf
  • 00:11:57 Ramon Massoni Badosa: https://www.biorxiv.org/content/10.1101/2021.03.16.435578v1.full.pdf
  • 00:54:53 Ramon Massoni Badosa: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3314444/

 

12 March 2021

Link: https://vimeo.com/520015741

 

5 March 2021

Link: https://vimeo.com/520015741

Topics:

   Trajectory analysis.

   Spatial Transcriptomics.

 

26 Feb 2021

First part of the meeting: https://vimeo.com/517702941

Second part of the meeting: https://vimeo.com/517702973

 

19 Feb 2021

Link: https://vimeo.com/519395950

 

12 Feb 2021

Link: https://vimeo.com/519395875

 

5  Feb 2021

Link: https://vimeo.com/519395825

 

Oct 2020

Link: https://vimeo.com/519395825